hvg_m25_pcc0.7
Parameters
Minimum occurrence: 25
Pearson correlation coefficient cutoff 0.7
SUPERFAMILY version sf169
TOTAL 1539 superfamilies class [abcdefg] analysed
Results
299 --- superfamilies class [abcdefg] in all 38 organisms
Correlation with number of different cell types
Genomes (SUPERFAMILY id):
cy ot ad dt tb em ra tl en nu pl ns an po xr kl al yl eu fc um cw cn aj ah de it df t1 tq xk gh di bw ro mh xq ht
Estimated number of celltypes (avg):
12.5 27.25 27.25 4.65 7.85 7.85 7.85 7.85 4.65 7.85 7.85 5.55 5.55 4.35 3.05 3.05 3.05 3.05 3.35 4.35 4.35 28.5 28.5 64 64 64 74 119.5 119.5 119.5 129.5 154 159 159 159 159 169 169
Function Category: total -- PCC>=0.7
TOTAL: 299 -- 101
Other 11 -- 1
Information 24 -- 4
General 28 -- 12
Regulation 56 -- 34
Processes_EC 27 -- 22
Processes_IC 63 -- 17
Metabolism 90 -- 11
Superfamilies with PCC>=0.7 correlation with number of cell types
Clustering parameters: cluster -f hvg_m25_pcc0.7.dup.pnorm.xclstr -g 1 -e 0 -p 1
Overview
Cluster --- NODE232X --- 4 ---
Cluster --- NODE255X --- 4 ---
Cluster --- NODE268X --- 2 ---
Cluster --- NODE120X --- 2 ---
Cluster --- NODE265X --- 123 ---
Cluster --- NODE270X --- 3 ---
Cluster --- NODE264X --- 106 ---
Cluster --- NODE6X --- 2 ---
Cluster --- NODE269X --- 4 ---
Cluster --- NODE263X --- 13 ---
Cluster --- NODE260X --- 2 ---
Cluster --- NODE242X --- 4 ---
Cluster --- NODE225X --- 3 ---
Cluster --- NODE237X --- 2 ---
Cluster --- NODE267X --- 5 ---
Cluster --- NODE257X --- 7 ---
All superfamilies (most abundant subset)
All hvg_m25_pcc0.7 dup clustered
Data
Clusters
Cluster -- NODE232X -- with 4 members
hvg_m25_pcc0.7.hier.dup.NODE232X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE232X
Cluster -- NODE255X -- with 4 members
hvg_m25_pcc0.7.hier.dup.NODE255X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE255X
Cluster -- NODE268X -- with 2 members
hvg_m25_pcc0.7.hier.dup.NODE268X
Data
Small categories
GO proc_m.sfmap
GO fcn_m.sfmap
Data for NODE268X
Cluster -- NODE120X -- with 2 members
hvg_m25_pcc0.7.hier.dup.NODE120X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE120X
Cluster -- NODE265X -- with 123 members
hvg_m25_pcc0.7.hier.dup.NODE265X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE265X
Cluster -- NODE270X -- with 3 members
hvg_m25_pcc0.7.hier.dup.NODE270X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE270X
Cluster -- NODE264X -- with 106 members
hvg_m25_pcc0.7.hier.dup.NODE264X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE264X
Cluster -- NODE6X -- with 2 members
hvg_m25_pcc0.7.hier.dup.NODE6X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE6X
Cluster -- NODE269X -- with 4 members
hvg_m25_pcc0.7.hier.dup.NODE269X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE269X
Cluster -- NODE263X -- with 13 members
hvg_m25_pcc0.7.hier.dup.NODE263X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE263X
Cluster -- NODE260X -- with 2 members
hvg_m25_pcc0.7.hier.dup.NODE260X
Data
Small categories
GO proc_m.sfmap
GO fcn_m.sfmap
Data for NODE260X
Cluster -- NODE242X -- with 4 members
hvg_m25_pcc0.7.hier.dup.NODE242X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE242X
Cluster -- NODE225X -- with 3 members
hvg_m25_pcc0.7.hier.dup.NODE225X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE225X
Cluster -- NODE237X -- with 2 members
hvg_m25_pcc0.7.hier.dup.NODE237X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE237X
Cluster -- NODE267X -- with 5 members
hvg_m25_pcc0.7.hier.dup.NODE267X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE267X
Cluster -- NODE257X -- with 7 members
hvg_m25_pcc0.7.hier.dup.NODE257X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE257X
16 superfamilies with more than 25 occurrences in at least one genome.