hvg_m25_pcc0.8
Parameters
Minimum occurrence: 25
Pearson correlation coefficient cutoff 0.8
SUPERFAMILY version sf169
TOTAL 1539 superfamilies class [abcdefg] analysed
Results
299 --- superfamilies class [abcdefg] in all 38 organisms
Correlation with number of different cell types
Genomes (SUPERFAMILY id):
cy ot ad dt tb em ra tl en nu pl ns an po xr kl al yl eu fc um cw cn aj ah de it df t1 tq xk gh di bw ro mh xq ht
Estimated number of celltypes (avg):
12.5 27.25 27.25 4.65 7.85 7.85 7.85 7.85 4.65 7.85 7.85 5.55 5.55 4.35 3.05 3.05 3.05 3.05 3.35 4.35 4.35 28.5 28.5 64 64 64 74 119.5 119.5 119.5 129.5 154 159 159 159 159 169 169
Function Category: total -- PCC>=0.8
TOTAL: 299 -- 76
Other 11 -- 1
Information 24 -- 2
General 28 -- 9
Regulation 56 -- 24
Processes_EC 27 -- 22
Processes_IC 63 -- 11
Metabolism 90 -- 7
Superfamilies with PCC>=0.8 correlation with number of cell types
Clustering parameters: cluster -f hvg_m25_pcc0.8.dup.pnorm.xclstr -g 1 -e 0 -p 1
Overview
Cluster --- NODE231X --- 3 ---
Cluster --- NODE120X --- 2 ---
Cluster --- NODE228X --- 2 ---
Cluster --- NODE235X --- 4 ---
Cluster --- NODE6X --- 2 ---
Cluster --- NODE210X --- 2 ---
Cluster --- NODE192X --- 8 ---
Cluster --- NODE237X --- 2 ---
Cluster --- NODE236X --- 9 ---
Cluster --- NODE202X --- 3 ---
Cluster --- NODE12X --- 2 ---
Cluster --- NODE232X --- 4 ---
Cluster --- NODE168X --- 2 ---
Cluster --- NODE220X --- 13 ---
Cluster --- NODE219X --- 10 ---
Cluster --- NODE201X --- 3 ---
Cluster --- NODE67X --- 2 ---
Cluster --- NODE185X --- 6 ---
Cluster --- NODE225X --- 3 ---
Cluster --- NODE230X --- 3 ---
Cluster --- NODE178X --- 2 ---
Cluster --- NODE233X --- 98 ---
Cluster --- NODE35X --- 2 ---
Cluster --- NODE239X --- 73 ---
Cluster --- NODE208X --- 2 ---
All superfamilies (most abundant subset)
All hvg_m25_pcc0.8 dup clustered
Data
Clusters
Cluster -- NODE231X -- with 3 members
hvg_m25_pcc0.8.hier.dup.NODE231X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE231X
Cluster -- NODE120X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE120X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE120X
Cluster -- NODE228X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE228X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE228X
Cluster -- NODE235X -- with 4 members
hvg_m25_pcc0.8.hier.dup.NODE235X
Data
Small categories
GO loc_m.sfmap
Data for NODE235X
Cluster -- NODE6X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE6X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE6X
Cluster -- NODE210X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE210X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE210X
Cluster -- NODE192X -- with 8 members
hvg_m25_pcc0.8.hier.dup.NODE192X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE192X
Cluster -- NODE237X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE237X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE237X
Cluster -- NODE236X -- with 9 members
hvg_m25_pcc0.8.hier.dup.NODE236X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE236X
Cluster -- NODE202X -- with 3 members
hvg_m25_pcc0.8.hier.dup.NODE202X
Data
Small categories
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE202X
Cluster -- NODE12X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE12X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE12X
Cluster -- NODE232X -- with 4 members
hvg_m25_pcc0.8.hier.dup.NODE232X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE232X
Cluster -- NODE168X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE168X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE168X
Cluster -- NODE220X -- with 13 members
hvg_m25_pcc0.8.hier.dup.NODE220X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE220X
Cluster -- NODE219X -- with 10 members
hvg_m25_pcc0.8.hier.dup.NODE219X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE219X
Cluster -- NODE201X -- with 3 members
hvg_m25_pcc0.8.hier.dup.NODE201X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE201X
Cluster -- NODE67X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE67X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE67X
Cluster -- NODE185X -- with 6 members
hvg_m25_pcc0.8.hier.dup.NODE185X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE185X
Cluster -- NODE225X -- with 3 members
hvg_m25_pcc0.8.hier.dup.NODE225X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE225X
Cluster -- NODE230X -- with 3 members
hvg_m25_pcc0.8.hier.dup.NODE230X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE230X
Cluster -- NODE178X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE178X
Data
Small categories
GO proc_m.sfmap
GO fcn_m.sfmap
Data for NODE178X
Cluster -- NODE233X -- with 98 members
hvg_m25_pcc0.8.hier.dup.NODE233X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE233X
Cluster -- NODE35X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE35X
Data
Small categories
Data for NODE35X
Cluster -- NODE239X -- with 73 members
hvg_m25_pcc0.8.hier.dup.NODE239X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE239X
Cluster -- NODE208X -- with 2 members
hvg_m25_pcc0.8.hier.dup.NODE208X
Data
Small categories
GO proc_m.sfmap
GO loc_m.sfmap
GO fcn_m.sfmap
Data for NODE208X
25 superfamilies with more than 25 occurrences in at least one genome.