--- 
- cat: Title
  title: John T. Prince
  anchor: 
- cat: Education
  info: 
  - events: 
    - name: HHMI Research Specialist (Post-doctoral)
      date: May 2008 - present
      description: 
      - Mass spectrometric identification of transient protein complexes
      - "Advisor: Natalie Ahn"
      location: University of Colorado (CU), Boulder, Colorado
    - name: PhD, Cell and Molecular Biology (Bioinformatics and Computational Biology)
      date: Aug 2001 - May 2008
      description: 
      - GPA 4.00/4.00
      location: University of Texas (UT), Center for Systems and Synthetic Biology, Austin, Texas
    - name: B.S., National Merit Scholar, Microbiology (Chemistry Minor)
      date: Dec. 2000
      description: 
      - Graduated Magna Cum Laude (3.89/4.00)
      location: Brigham Young University (BYU), Provo, Utah
- cat: Scientific Experience
  anchor: Experience
  info: 
  - events: 
    - name: Signal Transduction
      date: May 2008 - present
      description: 
      - <i>in vivo</i> cross-linking and mass spectrometry analysis of transient protein-protein interactions
      location: Dr. Natalie Ahn Lab, CU
    - name: Proteomics & Bioinformatics
      date: Jan. 2002 - May 2008
      description: 
      - Computational analysis of mass spectrometry proteomics data
      - Maintenance and operation of 2D-LC nanoelectrospray LTQ-Orbitrap and Ion Trap mass spectrometers
      - Creator and curator of the Open Proteomics Database (OPD)
      location: Dr. Edward Marcotte Lab, UT
    - name: Computational Phylogenetics
      date: Mar. - May 2002
      description: 
      - Investigation of site-likelihood parameters of Maximum Likelihood models
      - Wrote programs and performed computer simulations
      location: Dr. David Hillis Lab, UT
    - name: Antibody Engineering
      date: Oct. 2001 - Jan. 2002
      description: 
      - Directed evolution of heat stable antibodies by Phage Display
      location: Dr. George Georgiou Lab, UT
    - name: Organic Synthesis
      date: Jun. 1999 - Aug. 2001
      description: 
      - Synthesis of Multi-Drug Resistance reversal agents (cancer research)
      - Worked out a mass spectrometry screening assay
      - Performed NMR, column and radial chromatography, TLC
      location: Dr. Merritt Andrus Lab, BYU
    - name: Molecular Biology
      date: Fall 2000
      description: 
      - Isolated large, high adherence plasmid in E. coli for design of bacterial interference agents in poultry
      - Performed gel electrophoresis, plasmid preps, electroporation, high adherence assay, fluorescence microscopy
      location: Dr. Michael Leavitt Lab, BYU
- cat: Publications, Presentations, & Posters
  anchor: Publications
  info: 
  - bibliographies: 
    - journal: Analytical Chemistry
      title: Sample bias validation to examine the accuracy of large scale mass spectrometry proteomics peptide identification error estimates
      year: 2008
      bib_type: article_submitted
      authors: Prince JT and Marcotte EM
    - journal: Bioinformatics
      title: "mspire: Mass spectrometry proteomics in Ruby"
      year: 2008
      bib_type: article_submitted
      authors: Prince JT and Marcotte EM
    - journal: Analytical Chemistry
      title: Chromatographic alignment of ESI-LC-MS proteomics datasets by bijective interpolated dynamic time warping
      year: 2006
      bib_type: article
      authors: Prince JT and Marcotte EM
      vol: 78(17)
      pages: 6140-52
    - journal: Genome Research
      title: "Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias"
      year: 2005
      bib_type: article
      authors: Wang R, Prince JT, Graham DE, Marcotte EM
      vol: 15(8)
      pages: 1118-26
    - journal: Nature Biotechnology
      title: The need for a public proteomics repository
      year: 2004
      bib_type: article
      authors: Prince JT, Carlson MW, Wang R, Lu P, Marcotte EM
      vol: 22(4)
      pages: 471-2
    - journal: Bioinformatics
      title: A fast course filtering method for peptide identification by mass spectrometry
      year: 2006
      bib_type: article
      authors: Ramakrishnan SR, Rui M, Nakorchevskiy AA, Prince JT, Willard WS, Xu W, Marcotte EM, Miranker DP
      pages: 1524-31
      vol: 22(12)
- cat: Contact
  info: 
  - contact: 
      email: [see .html or .pdf]